Biblio

Found 10 results
Filters: Author is Rao, F.  [Clear All Filters]
2011
Seeber M., Felline A., Raimondi F., Muff S., Friedman R., Rao F., Caflisch A., Fanelli F..  2011.  Wordom: A user-friendly program for the analysis of molecular structures, trajectories, and free energy surfaces. Journal of Computational Chemistry. 32(6):1183-1194.
2007
Gfeller D., De Los Rios P., Caflisch A., Rao F..  2007.  Complex network analysis of free-energy landscapes. Proceedings of the National Academy of Sciences of the United States of America. 104(6):1817-1822.
Rao F., Settanni G., Caflisch A..  2007.  Estimation of folding probabilities and Phi values from molecular dynamics simulations of reversible peptide folding. Protein Folding Protocols. :225-249.
Seeber M., Cecchini M., Rao F., Settanni G., Caflisch A..  2007.  Wordom: A program for efficient analysis of molecular dynamics simulations. Bioinformatics. 23(19):2625-2627.
2005
Rao F., Settanni G., Guarnera E., Caflisch A..  2005.  Estimation of protein folding probability from equilibrium simulations. Journal of Chemical Physics. 122(18):184901.
Muff S., Rao F., Caflisch A..  2005.  Local modularity measure for network clusterizations. Physical Review E: Statistical, Nonlinear, and Soft Matter Physics. 72(5.2):056107.
Settanni G., Rao F., Caflisch A..  2005.  Phi-value analysis by molecular dynamics simulations of reversible folding. Proceedings of the National Academy of Sciences of the United States of America. 102(3):628-633.
2004
Rao F., Caflisch A..  2004.  The protein folding network. Journal of Molecular Biology. 342(1):299-306.
Cecchini M., Rao F., Seeber M., Caflisch A..  2004.  Replica exchange molecular dynamics simulations of amyloid peptide aggregation. Journal of Chemical Physics. 121(21):10748-10756.
2003
Rao F., Caflisch A..  2003.  Replica exchange molecular dynamics simulations of reversible folding. The Journal of Chemical Physics. 119(7):4035-4042.