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Abstract

We review our joint experimental-theoretical effort on the folding of photo-switchable α-helices. The folding kinetics of these peptides is profoundly non-exponential, which is attributed to a partitioning of the unfolded state into several misfolded traps. These traps are connected to the folded state in a hub-like fashion with folding barriers of different heights. Molecular dynamics simulations reveal a semi-quantitative agreement with the complex response observed in the experiment, allowing one to discuss the process in unprecedented detail. It is found that the nonexponential response is to a large extent introduced by the photo-linker used to initiate folding. Hence, folding of these cross-linked peptides emulates formation of a helical segment in the context of a globular protein rather than folding of an isolated peptide.

Year of Publication
2012
Journal
Current Physical Chemistry
Volume
2
Start Page
4
Issue
1
Number of Pages
4-11
Date Published
Jan 2012
Type of Article
Review Article
ISSN Number
1877-9476
DOI
10.2174/1877946811202010004
Alternate Journal
Curr. Phys. Chem.
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