TY - JOUR
KW - Computer Simulation
KW - Models, Molecular
KW - Algorithms
KW - Protein Conformation
KW - Models, Chemical
KW - Proteins
KW - Software
KW - Databases, Protein
KW - Database Management Systems
KW - Information Storage and Retrieval
KW - User-Computer Interface
AU - M. Seeber
AU - M. Cecchini
AU - F. Rao
AU - G. Settanni
AU - A. Caflisch
AB - <p>Wordom is a versatile program for manipulation of molecular dynamics trajectories and efficient analysis of simulations. Original tools in Wordom include a procedure to evaluate significance of sampling for principal component analysis as well as modules for clustering multiple conformations and evaluation of order parameters for folding and aggregation. The program was developed with special emphasis on user-friendliness, effortless addition of new modules and efficient handling of large sets of trajectories.</p>
BT - Bioinformatics
C1 - 0087
DA - 2007 Oct 1
DO - 10.1093/bioinformatics/btm378
IS - 19
J2 - Bioinformatics
LA - eng
M3 - Research Article
N2 - <p>Wordom is a versatile program for manipulation of molecular dynamics trajectories and efficient analysis of simulations. Original tools in Wordom include a procedure to evaluate significance of sampling for principal component analysis as well as modules for clustering multiple conformations and evaluation of order parameters for folding and aggregation. The program was developed with special emphasis on user-friendliness, effortless addition of new modules and efficient handling of large sets of trajectories.</p>
PY - 2007
SP - 2625
EP - 2627
T2 - Bioinformatics
TI - Wordom: A program for efficient analysis of molecular dynamics simulations
VL - 23
SN - 1367-4811
ER -