First name
E.
Last name
Paci
Hwang, W., Austin, S. L., Blondel, A., Boittier, E. D., Boresch, S., Buck, M., … Karplus, M. (2024). CHARMM at 45: Enhancements in accessibility, functionality, and speed. The Journal of Physical Chemistry B, X. https://doi.org/10.1021/acs.jpcb.4c04100 (Original work published)
Fu, B., Sahakyan, A. B., Camilloni, C., Tartaglia, G. G., Paci, E., Caflisch, A., … Cavalli, A. (2014). ALMOST: An all atom molecular simulation toolkit for protein structure determination. Journal of Computational Chemistry, 35(14), 1101-1105. https://doi.org/10.1002/jcc.23588 (Original work published)
Brooks, B. R., Brooks III, C. L., Mackerell, A. D., Nilsson, L., Petrella, R. J., Roux, B., … Karplus, M. (2009). CHARMM: The biomolecular simulation program. Journal of Computational Chemistry, 30(10), 1545-1614. https://doi.org/10.1002/jcc.21287 (Original work published)
Seeber, M., Fanelli, F., Paci, E., & Caflisch, A. (2006). Sequential unfolding of individual helices of bacterioopsin observed in molecular dynamics simulations of extraction from the purple membrane. Biophysical Journal, 91(9), 3276-3284. https://doi.org/10.1529/biophysj.106.088591 (Original work published)
Curcio, R., Caflisch, A., & Paci, E. (2005). Change of the unbinding mechanism upon a mutation: A molecular dynamics study of an antibody-hapten complex. Protein Science, 14(10), 2499-2514. https://doi.org/10.1110/ps.041280705 (Original work published 2005)
Paci, E., Caflisch, A., Plückthun, A., & Karplus, M. (2001). Forces and energetics of hapten-antibody dissociation: A biased molecular dynamics simulation study. Journal of Molecular Biology, 314(3), 589-605. https://doi.org/10.1006/jmbi.2001.5103 (Original work published)
Paci, E., Cavalli, A., Vendruscolo, M., & Caflisch, A. (2003). Analysis of the distributed computing approach applied to the folding of a small β peptide. Proceedings of the National Academy of Sciences of the United States of America, 100(14), 8217-8222. https://doi.org/10.1073/pnas.1331838100 (Original work published)
Cavalli, A., Haberthür, U., Paci, E., & Caflisch, A. (2003). Fast protein folding on downhill energy landscape. Protein Science, 12(8), 1801-1803. https://doi.org/10.1110/ps.0366103 (Original work published 2003)
Caflisch, A., & Paci, E. (2005). Molecular dynamics simulations to study protein folding and unfolding. In J. Buchner & T. Kiefhaber (Eds.), Protein Folding Handbook (Vol. 1, pp. 1143-1169). Weinheim: WILEY-VCH Verlag GmbH & Co.